Publication List of Todo Group

Preprint

• Synge Todo,
  Markov Chain Monte Carlo in Tensor Network Representation,
  preprint: arXiv:2412.02974.
• Keiichi Tamai, Tsuyoshi Okubo, Truong Vinh Truong Duy, Naotake Natori, Synge Todo,
  Universal Scaling Laws of Absorbing Phase Transitions in Artificial Deep Neural Networks,
  preprint: arXiv:2307.02284.
• Kwok Ho Pai, Shinichiro Akiyama, Synge Todo,
  Grassmann tensor renormalization group approach to (1+1)-dimensional two-color lattice QCD at finite density,
  preprint: arXiv:2410.09485.
• Ken M. Nakanishi, Synge Todo,
  Systematic construction of multi-controlled Pauli gate decompositions with optimal T-count,
  preprint: arXiv:2410.00910.
• 谷本寛樹, 渡大地, 篠崎佑太, 西山薫, 大久保毅, 藤堂眞治,
  テンソルトレインにおける重みの初期化方法の提案,
  preprint.
• Daichi Watari, Hiroki Tanimoto, Tsuyoshi Okubo, Synge Todo, Kaoru Nishiyama,
  Tensor Network-Based Light-Weight Energy Forecasting for Virtual Power Plant,
  preprint.
• Atsushi Iwaki,
  Truncation error in series expansions linking microcanonical and canonical ensembles,
  preprint: arXiv:2408.07520.
• Takumi Kobori, Synge Todo,
  Bayesian Inference of General Noise Model Parameters from Surface Code's Syndrome Statistics,
  preprint: arXiv:2406.08981.
• 渡大地, 谷本寛樹, 大久保毅, 藤堂眞治, 西山薫,
  テンソルネットワークを用いた電力需要予測モデルの軽量化に関する研究,
  preprint.
• Y. Kohsaka, S. Akutagawa, S. Omachi, Y. Iwamichi, T. Ono, I. Tanaka, S. Tateishi, H. Murayama, S. Suetsugu, K. Hashimoto, T. Shibauchi, M. O. Takahashi, M. G. Yamada, S. Nikolaev, T. Mizushima, S. Fujimoto, T. Terashima, T. Asaba, Y. Kasahara, Y. Matsuda,
  Imaging quantum interference in a monolayer Kitaev quantum spin liquid candidate,
  preprint: arXiv:2403.16553.
• Shota Sugawara, Ryuji Imamura,
  PUAD: Frustratingly Simple Method for Robust Anomaly Detection,
  preprint: arXiv:2402.15143.
• Yasuyuki Kato, Joji Nasu, Masahiro Sato, Tsuyoshi Okubo, Takahiro Misawa, Yukitoshi Motome,
  Spin Seebeck Effect as a Probe for Majorana Fermions in Kitaev Spin Liquids,
  preprint: arXiv:2401.13175.
• Robert van de Geijn, Maggie Myers, RuQing G. Xu, Devin Matthews,
  Deriving Algorithms for Triangular Tridiagonalization a (Skew-)Symmetric Matrix,
  preprint: arXiv:2311.10700.
• Sayan Mukherjee, Vorapong Suppakitpaisarn,
  Robustness for Spectral Clustering of General Graphs under Local Differential Privacy,
  preprint: arXiv:2309.06867.
• Sora Shiratani, Kazumasa A. Takeuchi, Daiki Nishiguchi,
  Route to turbulence via oscillatory states in polar active fluid under confinement,
  preprint: arXiv:2304.03306.
• RuQing G. Xu, Field G. Van Zee, Robert A. van de Geijn,
  GEMMFIP: Unifying GEMM in BLIS,
  preprint: arXiv:2302.08417.
• Masahiko G. Yamada, Takumi Sanno, Masahiro O. Takahashi, Yutaka Akagi, Hidemaro Suwa, Satoshi Fujimoto, Masafumi Udagawa,
  Matrix Product Renormalization Group: Potential Universal Quantum Many-Body Solver,
  preprint: arXiv:2212.13267.
• Taito Kutsuzawa, Synge Todo,
  Nested Iterative Shift-invert Diagonalization for Many-body Localization in the Random-field Heisenberg Chain,
  preprint: arXiv:2203.09732.
• Ruixiao Cao, Synge Todo,
  Fast-update in self-learning algorithm for continuous-time quantum Monte Carlo,
  preprint: arXiv:2106.11645.
• Kentaro Heya, Ken M. Nakanishi, Kosuke Mitarai, Keisuke Fujii,
  Subspace Variational Quantum Simulator,
  preprint: arXiv:1904.08566.
• Markus Wallerberger, Sergei Iskakov, Alexander Gaenko, Joseph Kleinhenz, Igor Krivenko, Ryan Levy, Jia Li, Hiroshi Shinaoka, Synge Todo, Tianran Chen, Xi Chen, James P. F. LeBlanc, Joseph E. Paki, Hanna Terletska, Matthias Troyer, Emanuel Gull,
  Updated Core Libraries of the ALPS Project,
  preprint: arXiv:1811.08331.
• Hiroshi Watanabe, Satoshi Morita, Hajime Inaoka, Haruhiko Matsuo, Synge Todo, Nobuyasu Ito,
  245 Billion Updates/s on a Molecular Dynamics Simulation Involving Multiple Bubble Nuclei,
  preprint.

Peer-Reviewed Articles

• Sora Shiratani, Synge Todo,
  Stochastic approximation analysis of dynamical quantum critical phenomena in long-range transverse-field Ising chain,
  Phys. Rev. E 110, 064106 (14pp) (2024). (preprint: arXiv:2305.14121)
• Hidemaro Suwa, Synge Todo,
  Control of Probability Flow in Markov Chain Monte Carlo---Nonreversibility and Lifting,
  J. Chem. Phys. 161, 174107 (10pp) (2024). (preprint: arXiv:1207.0258)
• Atsushi Iwaki, Soshun Ozaki,
  Solvable toy model of negative energetic elasticity,
  Phys. Rev. E 110, L032102 (6pp) (2024).
• Tohru Mashiko, Tsuyoshi Okubo,
  Quantum phase transition between spin liquid and spin nematics in spin-1 Kitaev honeycomb model,
  Phys. Rev. Research 6, 033110 (11pp) (2024). (preprint: arXiv:2403.11490)
• Ken M. Nakanishi, Takahiko Satoh, Synge Todo,
  Decompositions of multiple controlled-Z gates on various qubit-coupling graphs,
  Phys. Rev. A 110, 012604 (7pp) (2024). (preprint: arXiv:2109.13223)
• Yuri Alexeev, Maximilian Amsler, …, Synge Todo, et al.,
  Quantum-centric supercomputing for materials science: A perspective on challenges and future directions,
  Future Generation Computer Systems 160, 666-710 (2024). (preprint: arXiv:2312.09733)
• Shinichiro Akiyama, Yannick Meurice, Ryo Sakai,
  Tensor Renormalization Group for fermions,
  J. Phys.: Condens. Matter 36, 343002 (31pp) (2024). (preprint: arXiv:2401.08542)
• Nobuyuki Yoshioka, Tsuyoshi Okubo, Yasunari Suzuki, Yuki Koizumi, and Wataru Mizukami,
  Hunting for quantum-classical crossover in condensed matter problems,
  npj Quantum Information 10, 45 (10pp) (2024). (preprint: arXiv:2210.14109)
• H. Yamaguchi, T. Okubo, A. Matsuo, T. Kawakami, Y. Iwasaki, T. Takahashi, Y. Hosokoshi, and K. Kindo,
  Quantum spin state stabilized by coupling with classical spins,
  Phys. Rev. B 109, L100404 (2024).
• K. Imamura, Y. Mizukami, O. Tanaka, R. Grasset, M. Konczykowski, N. Kurita, H. Tanaka, Y. Matsuda, M. G. Yamada, K. Hashimoto, and T. Shibauchi,
  Defect-Induced Low-Energy Majorana Excitations in the Kitaev Magnet α−RuCl3,
  Phys. Rev. X 14, 011045 (2024). (preprint: arXiv:2306.1738)
• Sayan Mukherjee,
  Extremal numbers of hypergraph suspensions of even cycles,
  Eur. J. Comb. 118, 103935 (2024).
• Kota Ido, Mitsuaki Kawamura, Yuichi Motoyama, Kazuyoshi Yoshimi, Youhei Yamaji, Synge Todo, Naoki Kawashima, Takahiro Misawa,
  Update of HΦ: Newly added functions and methods in versions 2 and 3,
  Comp. Phys. Comm. 298, 109093 (2024). (preprint: arXiv:2307.13222)
• Sayan Mukherjee,
  Exact generalized Turán number for K3 versus suspension of P4,
  Discrete Mathematics 347, 113866 (7pp) (2024).
• Junyi Yang, Hidemaro Suwa, Derek Meyers, Han Zhang, Lukas Horak, Zhan Zhang, Evguenia Karapetrova, Jong-Woo Kim, Philip J. Ryan, Mark P. M. Dean, Lin Hao, Jian Liu,
  Extraordinary Magnetic Response of an Anisotropic 2D Antiferromagnet via Site Dilution,
  Nano Letters 23 (24), 11409-11415 (2023).
• Masahiro O. Takahashi, Masahiko G. Yamada, Masafumi Udagawa, Takeshi Mizushima, Satoshi Fujimoto,
  Nonlocal Spin Correlation as a Signature of Ising Anyons Trapped in Vacancies of the Kitaev Spin Liquid,
  Phys. Rev. Lett. 131, 236701 (2023). (preprint: arXiv:2211.13884)
• Hidemaro Suwa,
  Reducing rejection exponentially improves Markov chain Monte Carlo sampling,
  Physica A: Stat. Phys. Appl. 633, 129368 (2023). (preprint: arXiv:2208.03935)
• Shinichiro Akiyama, Yoshinobu Kuramashi,
  Critical endpoint of (3+1)-dimensional finite density Z3 gauge-Higgs model with tensor renormalization group,
  J. High Energy Phys. 10, 77 (2023). (preprint: arXiv:2304.07934)
• Tsuyoshi Okubo and Naoki Kawashima,
  Possibility of a topological phase transition in two-dimensional RP3 model,
  J. Phys. Soc. Jpn. 92, 114701 (2023). (preprint: arXiv:2112.15053)
• Shinichiro Akiyama,
  Matrix product decomposition for two- and three-flavor Wilson fermion: benchmark results in the lattice Gross-Neveu model at finite density,
  Phys. Rev. D 108, 034514 (2023). (preprint: arXiv:2304.01473)
• Dhruv Mubayi, Sayan Mukherjee,
  Triangles in graphs without bipartite suspensions,
  Discrete Math. 346, 113355 (19pp) (2023).
• Xizhi Liu, Sayan Mukherjee,
  Stability theorems for some Kruskal–Katona type results,
  Eur J. Combin. 110, 103666 (20pp) (2022). (preprint: arXiv:2006.04848)
• Seiji Yoshikawa, Ryuhei Sato, Ryosuke Akashi, Synge Todo, Shinji Tsuneyuki,
  A Noise-Robust Data Assimilation Method for Crystal Structure Prediction Using Powder Diffraction Intensity,
  J. Chem. Phys. 157, 224112 (8pp) (2022). (preprint: arXiv:2209.05850)
• Hidemaro Suwa,
  Lifted directed-worm algorithm,
  Phys. Rev. E 106, 055306 (9pp) (2022). (preprint: arXiv:2206.13881)
• Shinichiro Akiyama,
  Bond-weighting method for the Grassmann tensor renormalization group,
  J. High Energy Phys. 11, 030 (2022). (preprint: arXiv:2208.03227)
• Yuichi Motoyama, Kazuyoshi Yoshimi, Takeo Kato, Synge Todo,
  MateriApps LIVE! and MateriApps Installer: Environment for starting and scaling up materials science simulations,
  Software X 20, 101210 (8pp) (2022). (preprint: arXiv:2205.01991)
• Junyi Yang, Hidemaro Suwa, Derek Meyers, Han Zhang, Lukas Horak, Zhaosheng Wang, Gilberto Fabbris, Yongseong Choi, Jenia Karapetrova, Jong-Woo Kim, Daniel Haskel, Philip J. Ryan, M. P. M. Dean, Lin Hao, and Jian Liu,
  Quasi-Two-Dimensional Anomalous Hall Mott Insulator of Topologically Engineered Jeff=1/2 Electrons,
  Phys. Rev. X 12, 031015 (11pp) (2022). (preprint: arXiv:2206.01392)
• Yuichi Motoyama, Tsuyoshi Okubo, Kazuyoshi Yoshimi, Satoshi Morita, Takeo Kato, Naoki Kawashima,
  TeNeS: Tensor Network Solver for Quantum Lattice Systems,
  Comp. Phys. Comm. 279, 108437 (10pp) (2022). (preprint: arXiv:2112.13184)
• Masaki Gen, Hidemaro Suwa,
  Nematicity and fractional magnetization plateaus induced by spin-lattice coupling in the classical kagome-lattice Heisenberg antiferromagnet,
  Phys. Rev. B 105, 174424 (10pp) (2022). (preprint: arXiv:2202.09077)
• RuQing G. Xu, Tsuyoshi Okubo, Synge Todo, Masatoshi Imada,
  Optimized Implementation for Calculation and Fast-Update of Pfaffians Installed to the Open-Source Fermionic Variational Solver mVMC,
  Comp. Phys. Comm. 277, 108375 (10pp) (2022). (preprint: arXiv:2105.13098)
• Tomoyuki Morishita, Synge Todo,
  Randomized-gauge test for machine learning of Ising model order parameter,
  J. Phys. Soc. Jpn. 91, 044001 (9pp) (2022). (preprint: arXiv:2109.05533)
• D. G. Mazzone, Y. Shen, H. Suwa, G. Fabbris, J. Yang, S.-S. Zhang, H. Miao, J. Sears, Ke Jia, Y. G. Shi, M. H. Upton, D. M. Casa, X. Liu, Jian Liu, C. D. Batista, M. P. M. Dean,
  Antiferromagnetic excitonic insulator state in Sr₃Ir₂O₇,
  Nat. Commun. 13, 913 (8pp) (2022). (preprint: arXiv:2201.04030)
• Daiki Adachi, Tsuyoshi Okubo, Synge Todo,
  Bond-weighted tensor renormalization group,
  Phys. Rev. B 105, L060402 (6pp) (2022). (preprint: arXiv:2011.01679)
• Satoru Hayami, Tsuyoshi Okubo, Yukitoshi Motome,
  Phase shift in skyrmion crystals,
  Nat. Commum. 12, 6927 (6pp) (2021). (preprint: arXiv:2005.03168)
• Yasunari Suzuki, Yoshiaki Kawase, Yuya Masumura, Yuria Hiraga, Masahiro Nakadai, Jiabao Chen, Ken M. Nakanishi, Kosuke Mitarai, Ryosuke Imai, Shiro Tamiya, Takahiro Yamamoto, Tennin Yan, Toru Kawakubo, Yuya O. Nakagawa, Yohei Ibe, Youyuan Zhang, Hirotsugu Yamashita, Hikaru Yoshimura, Akihiro Hayashi, Keisuke Fujii,
  Qulacs: a fast and versatile quantum circuit simulator for research purpose,
  Quantum 5, 559 (34pp) (2021). (preprint: arXiv:2011.13524)
• Fumihiro Ishikawa, Hidemaro Suwa, Synge Todo,
  Neural Network Approach to Construction of Classical Integrable Systems,
  J. Phys. Soc. Jpn. 90, 093001 (5pp) (2021). (preprint: arXiv:2103.00372)
• H. Yamaguchi, N. Uemoto, T. Okubo, Y. Kono, S. Kittaka, T. Sakakibara, T. Yajima, S. Shimono, Y. Iwasaki, Y. Hosokoshi,
  Gapped ground state in a spin-1/2 frustrated square lattice,
  Phys. Rev. B 104, L060411 (5pp) (2021). (preprint: arXiv:2108.12761)
• H. Yamaguchi, Y. Iwasaki, Y. Kono, T. Okubo, S. Miyamoto, Y. Hosokoshi, A. Matsuo, T. Sakakibara, T. Kida, M. Hagiwara,
  Quantum critical phenomena in a spin-1/2 frustrated square lattice with spatial anisotropy,
  Phys. Rev. B 103, L220407 (5pp) (2021). (preprint: arXiv:2106.12126)
• Hong Yang, Hayate Nakano, Hosho Katsura,
  Symmetry-protected Topological Phases in Spinful Bosons with a Flat Band,
  Phys. Rev. Research. 3, 023210 (22pp) (2021). (preprint: arXiv:2003.01705)
• Yutaka Shikano, Hiroshi C. Watanabe, Ken M. Nakanishi, Yu-ya Ohnishi,
  Post-Hartree-Fock method in Quantum Chemistry for Quantum Computer,
  Euro. Phys. J. Spec. Top. (2021). (preprint: arXiv:2011.01544)
• Xinliang Lyu, RuQing G. Xu, Naoki Kawashima,
  Scaling dimensions from linearized tensor renormalization group transformations,
  Phys. Rev. Research 3, 023048 (16pp) (2021). (preprint: arXiv:2102.08136)
• Hayate Nakano, Tatsuhiko Shirai, Takashi Mori,
  Tensor-network approach to thermalization in open quantum many-body systems,
  Phys. Rev. E 103, L040102 (6pp) (2021). (preprint: arXiv:2012.12274)
• Hidemaro Suwa, Shang-Shun Zhang, Cristian D. Batista,
  Exciton condensation in bilayer spin-orbit insulator,
  Phys. Rev. Research 3, 013224 (11pp) (2021).
• Sh. Yamamoto, H. Suwa, T. Kihara, T. Nomura, Y. Kotani, T. Nakamura, Y. Skourski, S. Zherlitsyn, L. Prodan, V. Tsurkan, H. Nojiri, A. Loidl, J. Wosnitza,
  Element-specific field-induced spin reorientation and tetracritical point in MnCr₂S₄,
  Phys. Rev. B 103, L020408 (6pp) (2021). (preprint: arXiv:2008.13285)
• Hidemaro Suwa,
  Geometric allocation approach to accelerating directed worm algorithm,
  Phys. Rev. E 103, 013308 (14pp) (2021). (preprint: arXiv:1703.03136)
• Botao Li, Synge Todo, A. C. Maggs, Werner Krauth,
  Multithreaded event-chain Monte Carlo with local times,
  Comp. Phys. Comm. 261, 107702 (10pp) (2021). (preprint: arXiv:2004.11040)
• Ken M. Nakanishi, Keisuke Fujii, Synge Todo,
  Sequential minimal optimization for quantum-classical hybrid algorithms,
  Phys. Rev. Research 2, 043158 (10pp) (2020). (preprint: arXiv:1903.12166)
• Daiki Adachi, Tsuyoshi Okubo, Synge Todo,
  Anisotropic tensor renormalization group,
  Phys. Rev. B 102, 054432 (7pp) (2020). (preprint: arXiv:1906.02007)
• Takeo Hoshi, Mitsuaki Kawamura, Kazuyoshi Yoshimi, Yuichi Motoyama, Takahiro Misawa, Youhei Yamaji, Synge Todo, Naoki Kawashima, Tomohiro Sogabe,
  Kω - Open-source library for the shifted Krylov subspace method of the form (zI-H)x=b,
  Comp. Phys. Comm. 258, 107536 (10pp) (2021). (preprint: arXiv:2001.08707)
• Shohei Hayashida, Hajime Ishikawa, Yoshihiko Okamoto, Tsuyoshi Okubo, Zenji Hiroi, Gøran J. Nilsen, Hannu Mutka, Takatsugu Masuda,
  Zero-energy excitation in the classical kagome antiferromagnet NaBa₂Mn₃F₁₁,
  Phys. Rev. B 101, 214409 (6pp) (2020). (preprint: arXiv:2006.01526)
• Tatsuhiko Shirai, Takashi Mori,
  Thermalization in Open Many-Body Systems Based on Eigenstate Thermalization Hypothesis,
  Phys. Rev. E 101, 042116 (11pp) (2020). (preprint: arXiv:1812.09713)
• Hyun-Yong Lee, Ryui Kaneko, Li Ern Chern, Tsuyoshi Okubo, Youhei Yamaji, Naoki Kawashima, Yong Baek Kim,
  Magnetic field induced quantum phases in a tensor network study of Kitaev magnets,
  Nat. Comm. 11, 1639 (7pp) (2020). (preprint: arXiv:1908.07671)
• A. Miyata, H. Suwa, T. Nomura, L. Prodan, V. Felea, Y. Skourski, J. Deisenhofer, H.-A. Krug von Nidda, O. Portugall, S. Zherlitsyn, V. Tsurkan, J. Wosnitza, A. Loidl,
  Spin-lattice coupling in a ferrimagnetic spinel: Exotic H−T phase diagram of MnCr₂S₄ up to 110 T,
  Phys. Rev. B 101, 054432 (8pp) (2020). (preprint: arXiv:1911.12103)
• Hyun-Yong Lee, Ryui Kaneko, Tsuyoshi Okubo, Naoki Kawashima,
  Abelian and Non-Abelian Chiral Spin Liquids in a Compact Tensor Network Representation,
  Phys. Rev. B 101, 035140 (9pp) (2020). (preprint: arXiv:1907.02268)
• Tatsuhiko Shirai, Synge Todo, Seiji Miyashita,
  Dynamical phase transition in Floquet optical bistable systems: An approach from finite-size quantum systems,
  Phys. Rev. A 101, 013809 (7pp) (2020). (preprint: arXiv:1910.10618)
• Tokuro Shimokawa, Tsuyoshi Okubo, Hikaru Kawamura,
  Multiple-q states of the J₁-J₂ classical honeycomb-lattice Heisenberg antiferromagnet under magnetic fields,
  Phys. Rev. B 100, 224404 (15pp) (2019). (preprint: arXiv:1902.01582)
• Hayate Nakano, Seiji Miyashita,
  Characterization of localized effective spins in gapped quantum spin chains,
  Phys. Rev. B 100, 195105 (11pp) (2019).
• Ken M. Nakanishi, Kosuke Mitarai, Keisuke Fujii,
  Subspace-search variational quantum eigensolver for excited states,
  Phys. Rev. Research 1, 033062 (7pp) (2019). (preprint: arXiv:1810.09434)
• Hyun-Yong Lee, Ryui Kaneko, Tsuyoshi Okubo, Naoki Kawashima,
  Gapless Kitaev Spin Liquid to Classical String Gas through Tensor Networks,
  Phys. Rev. Lett. 123, 087203 (6pp) (2019). (preprint: arXiv:1901.05786)
• Hidemaro Suwa, Justin S. Smith, Nicholas Lubbers, Cristian D. Batista, Gia-Wei Chern, Kipton Barros,
  Machine learning for molecular dynamics with strongly correlated electrons,
  Phys. Rev. B 99, 161107 (5pp) (2019). (preprint: arXiv:1811.01914)
• R. Okuma, D. Nakamura, T. Okubo, A. Miyake, A. Matsuo, K. Kindo, M. Tokunaga, N. Kawashima, S. Takeyama, Z. Hiroi,
  A series of magnon crystals appearing under ultrahigh magnetic fields in a kagomé antiferromagnet,
  Nat. Comm. 10, 1229 (7pp) (2019).
• Daiki Adachi, Naoto Tsujimoto, Ryosuke Akashi, Synge Todo, Shinji Tsuneyuki,
  Search for Common Minima in Joint Optimization of Multiple Cost Functions,
  Comp. Phys. Comm. 241, 92-97 (2019). (preprint: arXiv:1808.06846)
• Hiroshi Watanabe, Satoshi Morita, Synge Todo, Naoki Kawashima,
  Fast algorithm for generating random bit strings and multispin coding for directed percolation,
  J. Phys. Soc. Jpn. 88, 024004 (8pp) (2019). (preprint: arXiv:1808.05009)
• Synge Todo, Haruhiko Matsuo, Hideyuki Shitara,
  Parallel loop cluster quantum Monte Carlo simulation of quantum magnets based on global union-find graph algorithm,
  Comp. Phys. Comm. 239, 84-93 (2019). (preprint: arXiv:1810.07485)
• Fumihiro Ishikawa, Synge Todo,
  Localized mode and nonergodicity of a harmonic oscillator chain,
  Phys. Rev. E 98, 062140 (8pp) (2018). (preprint: arXiv:1805.02923)
• Yuichi Motoyama, Synge Todo,
  Z_N Berry phase and symmetry protected topological phases of SU(N) antiferromagnetic Heisenberg chain,
  Phys. Rev. B 98, 195127 (6pp) (2018). (preprint: arXiv:1508.00960)
• Tatsuhiko Shirai, Synge Todo, Hans de Raedt, Seiji Miyashita,
  Optical bistability in a low-photon-density regime,
  Phys. Rev. A 98, 043802 (13pp) (2018). (preprint: arXiv:1804.09853)
• Tatsuhiko Shirai, Takashi Mori, Seiji Miyashita,
  Floquet–Gibbs state in open quantum systems,
  Eur. Phys. J. Special Topics 227, 323-333 (2018). (preprint: arXiv:arXiv.1801.02838)
• H. Yamaguchi, Y. Sasaki, T. Okubo, M. Yoshida, T. Kida, M. Hagiwara, Y. Kono, S. Kittaka, T. Sakakibara, M. Takigawa, Y. Iwasaki, Y. Hosokoshi,
  Field-enhanced quantum fluctuation in an S=1/2 frustrated square lattice,
  Phys. Rev. B 98, 094402 (6pp) (2018). (preprint: arXiv:1808.06812)
• Lin Hao, D. Meyers, Hidemaro Suwa, Junyi Yang, Clayton Frederick, Tamene R. Dasa, Gilberto Fabbris, Lukas Horak, Dominik Kriegner, Yongseong Choi, Jong-Woo Kim, Daniel Haskel, Philip J. Ryan, Haixuan Xu, Cristian D. Batista, M. P. M. Dean, Jian Liu,
  Giant magnetic response of a two-dimensional antiferromagnet,
  Nat. Phys. 14, 806-810 (2018). (preprint: arXiv:1804.08780)
• Naoto Tsujimoto, Daiki Adachi, Ryosuke Akashi, Synge Todo, Shinji Tsuneyuki,
  Crystal structure prediction supported by incomplete experimental data,
  Phys. Rev. Materials 2, 053801 (7pp) (2018). (preprint: arXiv:1705.08613)
• Shohei Hayashida, Hajime Ishikawa, Yoshihiko Okamoto, Tsuyoshi Okubo, Zenji Hiroi, Maxim Avdeev, Pascal Manuel, Masato Hagihala, Minoru Soda, Takatsugu Masuda,
  Magnetic state selected by magnetic dipole interaction in the kagome antiferromagnet NaBa2Mn3F11,
  Phys. Rev. B 97, 054411 (2018). (preprint: arXiv:1712.06740)
• Gia-Wei Chern, Kipton Barros, Zhentao Wang, Hidemaro Suwa, Cristian D. Batista,
  Semiclassical dynamics of spin density waves,
  Phys. Rev. B 97, 035120 (2018). (preprint: arXiv:1708.08050)
• Kazuya Nomura, Yasuhiro H. Matsuda, Yasuo Narumi, Koichi Kindo, Shojiro Takeyama,Yuko Hosokoshi, Toshio Ono, Naoya Hasegawa, Hidemaro Suwa, Synge Todo,
  Magnetization process of the S = 1/2 two-leg organic spin-ladder compound BIP-BNO,
  J. Phys. Soc. Jpn. 86, 104713 (3pp) (2017). (preprint: arXiv:1706.08008)
• Tsuyoshi Okubo, Kazuya Shinjo, Youhei Yamaji, Naoki Kawashima, Shigetoshi Sota, Takami Tohyama, Masatoshi Imada,
  Ground-state properties of Na2IrO3 determined from an ab initio Hamiltonian and its extensions containing Kitaev and extended Heisenberg interactions,
  Phys. Rev. B 96, 054434 (2017).
• Yu-Chin Tzeng, Hiroaki Onishi, Tsuyoshi Okubo, Ying-Jer Kao,
  Quantum phase transitions driven by rhombic-type single-ion anisotropy in the S = 1 Haldane chain,
  Phys. Rev. B 96, 060404(R) (2017).
• Mitsuaki Kawamura, Kazuyoshi Yoshimi, Takahiro Misawa, Youhei Yamaji, Synge Todo, Naoki Kawashima,
  Quantum Lattice Model Solver HΦ,
  Comp. Phys. Comm. 217, 180-192 (2017). (preprint: arXiv:1703.03637)
• Alexander Gaenko, Andrey E. Antipov, Gabriele Carcassi, Tianran Chen, Xi Chen, Qiaoyuan Dong, Lukas Gamper, Jan Gukelberger, Ryo Igarashi, Sergey Iskakov, Mario Kӧnz, James P. F. LeBlanc, Ryan Levy, Ping Nang Ma, Joseph E Paki, Hiroshi Shinaoka, Synge Todo, Matthias Troyer, Emanuel Gull,
  Updated Core Libraries of the ALPS Project,
  Comp. Phys. Comm. 213, 235-251 (2017). (preprint: arXiv:1609.03930)
• Toshiki Horita, Hidemaro Suwa, Synge Todo,
  Upper and lower critical decay exponents of Ising ferromagnet with long-range interaction,
  Phys. Rev. E 95, 012143 (11pp) (2017). (preprint: arXiv:1605.09496)
• Arnab Sen, Hidemaro Suwa, Anders W. Sandvik,
  Velocity of excitations in ordered, disordered, and critical antiferromagnets,
  Phys. Rev. B 92, 195145 (2015). (preprint: arXiv:1505.02535)
• Shinya Yasuda, Hidemaro Suwa, Synge Todo,
  Stochastic approximation of dynamical exponent at quantum critical point,
  Phys. Rev. B 92, 104411 (10pp) (2015). (preprint: arXiv:1506.04837)
• Hidemaro Suwa, Synge Todo,
  Generalized Moment Method for Gap Estimation and Quantum Monte Carlo Level Spectroscopy,
  Phys. Rev. Lett. 115, 080601 (5pp) (2015). (preprint: arXiv:1402.0847)
• Takafumi Suzuki, Kenji Harada, Haruhiko Matsuo, Synge Todo, Naoki Kawashima,
  Thermal Phase Transition of Generalized Heisenberg Models for SU(N) Spins on Square and Honeycomb Lattices,
  Phys. Rev. B 91, 094414 (7pp) (2015).
• Akiko Masaki, Takafumi Suzuki, Kenji Harada, Synge Todo, Naoki Kawashima,
  Parallelized Quantum Monte Carlo Algorithm with Nonlocal Worm Updates,
  Phys. Rev. Lett. 112, 140603 (5pp) (2014). (preprint: arXiv:1307.0328)
• Shinya Yasuda, Synge Todo,
  Monte Carlo simulation with aspect ratio optimization: Anomalous anisotropic scaling in dimerized antiferromagnet,
  Phys. Rev. E 88, 061301(R) (5pp) (2013). (preprint: arXiv:1307.4529)
• Kenji Harada, Takafumi Suzuki, Tsuyoshi Okubo, Haruhiko Matsuo, Jie Lou, Hiroshi Watanabe, Synge Todo, Naoki Kawashima,
  Possibility of Deconfined Criticality in SU(N) Heisenberg Models at Small N,
  Phys. Rev. B 88, 220408(R) (4pp) (2013). (preprint: arXiv:1307.0501)
• H. Nakano S. Todo, T. Sakai,
  Long-Range Order of the Three-Sublattice Structure in the S=1 Heisenberg Antiferromagnet on the Spatially Anisotropic Triangular Lattice,
  J. Phys. Soc. Jpn. 82, 043715 (5pp) (2013). (preprint: arXiv:1302.6663)
• Yuichi Motoyama, Synge Todo,
  Path-integral Monte Carlo method for the local Z₂ Berry phase,
  Phys. Rev. E 87, 021301(R) (5pp) (2013). (preprint: arXiv:1211.3471)
• J. S. M. Anderson, M. Nakata, R. Igarashi, K. Fujisawa, M. Yamashita,
  The second-order reduced density matrix method and the two-dimensional Hubbard model,
  Computational and Theoretical Chemistry 1003, 22-27 (2013).
• J. Nasu, S. Todo, S. Ishihara,
  Ordering and Excitation in Orbital Compass Model on a Checkerboard Lattice,
  Phys. Rev. B 85, 205141 (12pp) (2012). (preprint: arXiv:1203.3683)
• T. Nakada, T. Mori, S. Miyashita, M. Nishino, S. Todo, W. Nicolazzi, P. A. Rikvold,
  Critical temperature and correlation length of an elastic interaction model for spin-crossover materials,
  Phys. Rev. B 85, 054408 (8pp) (2012). (preprint: arXiv:1110.6257)
• B. Bauer, L. D. Carr, A. Feiguin, J. Freire, S. Fuchs, L. Gamper, J. Gukelberger, E. Gull, S. Gürtler, A. Hehn, R. Igarashi, S.V. Isakov, D. Koop, P.N. Ma, P. Mates, H. Matsuo, O. Parcollet, G. Pawlowski, J.D. Picon, L. Pollet, E. Santos, V.W. Scarola, U. Schollwöck, C. Silva, B. Surer, S. Todo, S. Trebst, M. Troyer, M.L. Wall, P. Werner, S. Wessel,
  The ALPS project release 2.0: Open source software for strongly correlated systems,
  J. Stat. Mech. P05001 (34pp) (2011). (preprint: arXiv:1101.2646)
• A. van Rynbach, S. Todo, S. Trebst,
  Orbital Ordering in e_g Orbital Systems: Ground States and Thermodynamics of the 120° Model,
  Phys. Rev. Lett. 105, 146402 (4pp) (2010). (preprint: arXiv:1006.4604)
• Hidemaro Suwa, Synge Todo,
  Markov Chain Monte Carlo Method without Detailed Balance,
  Phys. Rev. Lett. 105, 120603 (4pp) (2010). (preprint: arXiv:1007.2262)
• K. Yamamoto, S. Todo, S. Miyashita,
  Successive phase transitions at finite temperatures of the supersolid in the three-dimensional extended Bose-Hubbard model,
  Phys. Rev. B 79, 094503 (6pp) (2009). (preprint: arXiv:0807.0948)
• Kouki Fukui, Synge Todo,
  Order-N cluster Monte Carlo method for spin systems with long-range interactions,
  J. Comp. Phys. 228, 2629-2642 (2009). (preprint: arXiv:0802.0272)
• H. Yamaguchi, S. Kimura, Z. Honda, K. Okunishi, S. Todo, K. Kindo, M. Hagiwara,
  High-Field Magnetism of the Spin-Ladder Material Na2Fe2(C2O4)3(H2O)2,
  J. Phys. Soc. Jpn. 78, 124701 (6pp) (2009).
• Synge Todo, Akira Shibasaki,
  Improved chain mean-field theory for quasi-one-dimensional quantum magnets,
  Phys. Rev. B 78, 224411 (8pp) (2008). (preprint: arXiv:0805.3097)
• D. Yamamoto, S. Todo, S. Kurihara,
  Green's function theory for spin-1/2 ferromagnets with an easy-plane exchange anisotropy,
  Phys. Rev. B 78, 024440 (7pp) (2008).
• A.F. Albuquerque, F. Alet, P. Corboz, P. Dayal, A. Feiguin, L. Gamper, E. Gull, S. Gürtler, A. Honecker, R. Igarashi, M. Körner, A. Kozhevnikov, A. Läuchli, S.R. Manmana, M. Matsumoto, I.P. McCulloch, F. Michel, R.M. Noack, G. Pawlowski, L. Pollet, T. Pruschke, U. Schollwöck, S. Todo, S. Trebst, M. Troyer, P. Werner, S. Wessel (ALPS collaboration),
  The ALPS project release 1.3: open source software for strongly correlated systems,
  J. Mag. Mag. Mat. 310, 1187-1193 (2007). (preprint: arXiv:0801.1765)
• M. Al Hajj, F. Alet, S. Capponi, M.B. Lepetit, J.P. Malrieu, S. Todo,
  Parity law of the singlet-triplet gap in graphitic ribbons,
  Eur. Phys. J. B 51, 517-522 (2006). (preprint: arXiv:cond-mat/0601293)
• Synge Todo,
  Universal Reduction of Effective Coordination Number in the Quasi-One-Dimensional Ising Model,
  Phys. Rev. B 74, 104415 (11pp) (2006). (preprint: arXiv:cond-mat/0606790)
• Chitoshi Yasuda, Synge Todo, Hajime Takayama,
  Bond-Dilution-Induced Quantum Phase Transitions in Heisenberg Antiferromagnets,
  J. Phys. Soc. Jpn. 75, 124704 (7pp) (2006). (preprint: arXiv:cond-mat/0607786)
• Takayuki Arakawa, Synge Todo, Hajime Takayama,
  Randomness-Driven Quantum Phase Transition in Bond-Alternating Haldane Chain,
  J. Phys. Soc. Jpn. 74, 1127-1130 (2005). (preprint: arXiv:cond-mat/0410755)
• C. Yasuda, S. Todo, K. Hukushima, F. Alet, M. Keller, M. Troyer, H. Takayama,
  Neel Temperature of Quasi-Low-Dimensional Heisenberg Antiferromagnets,
  Phys. Rev. Lett. 94, 217201 (4pp) (2005). (preprint: arXiv:cond-mat/0312392)
• F. Alet, P. Dayal, A. Grzesik, A. Honecker, M. Körner, A. Läuchli, S.R. Manmana, I.P. McCulloch, F. Michel, R.M. Noack, G. Schmid, U. Schollwöck, F. Stöckli, S. Todo, S. Trebst, M. Troyer, P. Werner, S. Wessel (ALPS collaboration),
  The ALPS project: open source software for strongly correlated systems,
  J. Phys. Soc. Jpn. Suppl. 74, 30-35 (2005). (preprint: arXiv:cond-mat/0410407)
• M. Matsumoto, T. Sakai, M. Sato, H. Takayama, S. Todo,
  Quantum phase transitions of spin chiral nanotubes,
  Physica E 29, 660-663 (2005). (preprint: arXiv:cond-mat/0506626)
• Munehisa Matsumoto, Synge Todo, Masaaki Nakamura, Chitoshi Yasuda, Hajime Takayama,
  Gound state of antiferromagnetic Heisenberg two-leg ladder in terms of the valence-bond solid picture,
  Physica B 329-333, 1010-1011 (2003). (preprint: arXiv:cond-mat/0206386)
• Masaaki Nakamura and Synge Todo,
  Order Parameter to Characterize Valence-Bond-Solid States in Quantum Spin Chains,
  Phys. Rev. Lett. 89, 077204 (4pp) (2002). (preprint: arXiv:cond-mat/0112377)
• G. Schmid, S. Todo, M. Troyer, A. Dorneich,
  Finite-Temperature Phase Diagram of Hard-Core Bosons in Two Dimensions,
  Phys. Rev. Lett. 88, 167208 (4pp) (2002). (preprint: arXiv:cond-mat/0110024)

Conference Proceedings

• Shinichiro Akiyama,
  Implementation of bond-weighting method for the Grassmann tensor renormalization group,
  Proceedings of The 40th International Symposium on Lattice Field Theory PoS (LATTICE2023) 453, 370 (2023). (preprint: arXiv:2311.17691)
• Shinichiro Akiyama, Raghav G. Jha, Judah Unmuth-Yockey,
  Tensor renormalization group study of 3D principal chiral model,
  Proceedings of The 40th International Symposium on Lattice Field Theory PoS (LATTICE2023) 453, 355 (2023). (preprint: arXiv:2312.11649)
• RuQing G. Xu, Field G. Van Zee, Robert A. van de Geijn,
  Towards a Unified Implementation of GEMM in BLIS,
  ICS '23: Proceedings of the 37th International Conference on Supercomputing 111-121 (2023). (preprint: arXiv:2302.08417)
• 玉井敬一, 大久保毅, ヴィン チュオン ズイ チュオン, 名取直毅, 藤堂眞治,
  人工深層ニューラルネットワークが示す吸収状態転移,
  人工知能学会全国大会論文集 JSAI2023, 2Q6OS20b02 (2023).
• Hidemaro Suwa, Shang-Shun Zhang, Cristian D. Batista,
  BCS-BEC Crossover of Triplet Exciton Condensation in Bilayer Systems,
  JPS Conf. Proc. 38, 011168 (6pp) (2023). (preprint: arXiv:2209.07178)
• Ken Nakanishi, Shin-ichi Maeda, Takeru Miyato, Daisuke Okanohara,
  Neural Multi-scale Image Compression,
  in Computer Vision – ACCV 2018. ACCV 2018. Lecture Notes in Computer Science, vol 11366, pp. 718-732 (Springer, Cham, 2018). (preprint: arXiv:1805.06386)
• Hiroshi Watanabe, Satoshi Morita, Hajime Inaoka, Haruhiko Matsuo, Synge Todo, Nobuyasu Ito,
  Scalable and Highly SIMD-vectorized Molecular Dynamics Simulation Involving Multiple Bubble Nuclei,
  in Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis 2015 (SC15) (Austin, USA, Nov. 2015).
• Yusuke Konishi, Ryo Igarashi, Shusuke Kasamatsu, Takeo Kato, Naoki Kawashima, Tsutomu Kawatsu, Hikaru Kouta, Masashi Noda, Shoichi Sasaki, Yayoi Terada, Synge Todo, Shigehiro Tsuchida, Kazuyoshi Yoshimi, Kanako Yoshizawa,
  MateriApps --- a Portal Site of Materials Science Simulation,
  JPS Conf. Proc. 5, 011007 (5pp) (2015).
• Yuichi Motoyama, Synge Todo,
  Path-Integral Monte Carlo for the Gauge-Fixed Berry Connection and the Local Z₂ Berry Phase,
  JPS Conf. Proc. 1, 012130 (5pp) (2014). (preprint: arXiv:1310.0205)
• Shinya Yasuda, Synge Todo,
  Numerical Analysis of Quantum Phase Transitions with Dynamic Control of Anisotropy,
  JPS Conf. Proc. 1, 012127 (5pp) (2014).
• Synge Todo, Hidemaro Suwa,
  Geometric Allocation Approaches in Markov Chain Monte Carlo,
  J. Phys.: Conf. Ser. 473, 012013 (10pp) (2013). (preprint: arXiv:1310.6615)
• Synge Todo, Haruhiko Matsuo, Hideyuki Shitara,
  Loop Cluster Monte Carlo Simulation of Quantum Magnets Based on Global Union-Find Algorithm,
  in Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis 2013 (SC13) (Denver, USA, Nov. 2013).
• 諏訪秀麿, 藤堂眞治,
  詳細つりあいを満たさないマルコフ連鎖モンテカルロ法とその一般化,
  数理解析研究所 講究録 1848, 93-107 (2013).
• 片桐孝洋, 大島聡史, 中島研吾, 米村崇, 熊洞宏樹, 樋口清隆, 橋本昌人, 高山 恒一, 藤堂眞治, 岩田潤一, 内田和之, 佐藤正樹, 羽角博康, 黒木聖夫,
  レイテンシコアの高度化・高効率化による将来のHPCIシステムに関する調査研究のためのアプリケーション最適化と異機種計算機環境での性能評価,
  情報処理学会研究報告 HPC-139(4), 1-9 (2013).
• Hidemaro Suwa, Synge Todo,
  Geometric allocation approach for transition kernel of Markov chain,
  in Monte Carlo Methods and Applications (proceedings of Eighth IMACS Seminar on Monte Carlo Methods), ed. K. K. Sabelfeld, I. Dimov, pp. 213-222 (De Gruyter, Berlin, 2012). (preprint: arXiv:1106.3562)
• 片桐孝洋, 大島聡史, 中島研吾, 米村崇, 熊洞宏樹, 樋口清隆, 橋本昌人, 高山恒一, 藤堂眞治, 岩田潤一, 内田和之, 佐藤正樹, 羽角博康, 黒木聖夫,
  レイテンシコアの高度化・高効率化による将来のHPCIシステムに関する調査研究のためのアプリケーションと性能評価,
  情報処理学会研究報告 HPC-137(2), 1-12 (2012).
• Daisuke Yamamoto, Synge Todo, Susumu Kurihara,
  Application of the Green's Function Method to an Easy-Plane Heisenberg Model,
  J. Phys.: Conf. Ser. 150, 042234 (4pp) (2009).
• Munehisa Matsumoto, Synge Todo, Chitoshi Yasuda, Hajime Takayama,
  Quantum Phase Transitions of Quasi-One-Dimensional Heisenberg Antiferromagnets,
  in Computer Simulation Studies in Condensed-Matter Physics XVI, ed. D. P. Landau, S. P. Lewis, and H.-B. Schuettler, pp. 61-66 (Springer-Verlag, Berlin, 2004). (preprint: arXiv:cond-mat/0310619)
• Synge Todo,
  Parallel Quantum Monte Carlo Simulation of S=3 Antiferromagnetic Heisenberg Chain,
  in Computer Simulation Studies in Condensed-Matter Physics XV, ed. D. P. Landau, S. P. Lewis, and H.-B. Schuettler, pp. 89-94 (Springer-Verlag, Berlin, 2003).
• Guido Schmid, Synge Todo, Matthias Troyer, George Batrouni,
  Melting of Stripes in a Two Dimensional Hard-Core Boson Hubbard Model,
  in Computer Simulation Studies in Condensed-Matter Physics XV, ed. D. P. Landau, S. P. Lewis, and H.-B. Schuettler, pp. 95-99 (Springer-Verlag, Berlin, 2003).
• Chitoshi Yasuda, Synge Todo, Munehisa Matsumoto, Hajime Takayama,
  Bond-dilution effects on two-dimensional spin-gapped Heisenberg antiferromagnets,
  J. Phys. Chem. Solids 63, 1607-1610 (2002). (preprint: arXiv:cond-mat/0109137)
• Chitoshi Yasuda, Synge Todo, Munehisa Matsumoto, Hajime Takayama,
  Dilution Effects on Two-Dimensional Antiferromagnets with Non-Magnetic Spin-Gapped Ground State,
  Prog. Theor. Phys. Suppl. 145, 339-344 (2002). (preprint: arXiv:cond-mat/0204397)
• Munehisa Matsumoto, Synge Todo, Chitoshi Yasuda, Hajime Takayama,
  Gound State of S=1 Heisenberg Ladders,
  Prog. Theor. Phys. Suppl. 145, 221-224 (2002).
• Masaaki Nakamura, Synge Todo,
  Novel Order Parameter to Characterize Valence-Bond-Solid States,
  Prog. Theor. Phys. Suppl. 145, 217-220 (2002). (preprint: arXiv:cond-mat/0201204)
• Synge Todo,
  Quantum Cluster Algorithm Monte Carlo Method and its Application to Higher-Spin Heisenberg Antiferromagnets,
  Prog. Theor. Phys. Suppl. 145, 188-193 (2002).

Books / Commentaries / Reports

• 尾崎泰助, 加藤岳生, 井戸康太, 福田将大, 藤堂眞治,
  物性研の計算物性科学コミュニティ支援活動（その2：最終回）,
  固体物理 59, 381-387 (2024).
• 藤堂眞治, 足立幸穂 (編) (HPCIC計算科学フォーラム),
  計算科学ロードマップ2023.
• Kenji Harada, Hiroaki Matsueda, Tsuyoshi Okubo,
  Application of Tensor Network Formalism for Processing Tensor Data,
  in Advanced Mathematical Science for Mobility Society, ed. Kazushi Ikeda, Yoshiumi Kawamura, Kazuhisa Makino, Satoshi Tsujimoto, Nobuo Yamashita, Shintaro Yoshizawa, Hanna Sumita, pp. 79-100 (Springer, Singapore, 2024).
• 大久保毅,
  量子多体系とテンソルネットワーク,
  数理科学12月号 58-64 (2022).
• 大久保毅,
  拡張キタエフ模型における熱ホール伝導度のテンソルネットワーク法による研究,
  固体物理 57, 633-642 (2022).
• 諏訪秀麿, 藤堂眞治,
  確率の流れをあやつるモンテカルロ法---詳細つりあいの破れとリフティング,
  日本物理学会誌 77, 731-739 (2022).
• 大久保毅,
  テンソルネットワークの将来,
  数理科学 2月号 65-72 (2022).
• 井戸康太, 笠松秀輔, 加藤岳生, 藤堂眞治,
  物質科学シミュレーションのポータルサイトMateriApps -シミュレーション初心者のためのソフトウェアの探し方-,
  静電気学会誌 45, 188 (2021).
• M. コーエン, S. ルイ(著) 小田垣孝, 吉留崇, 大久保毅(共訳),
  現代の物性物理学 (物理学叢書111) (吉岡書店, 2021).
• 藤原毅夫, 藤堂眞治,
  データ科学のための微分積分・線形代数 - MATLABで体験する数学基礎 (東京大学出版会, 2021).
• 藤堂眞治,
  Google Colab x Python! 科学シミュレータ製作,
  トラ技ジュニア 42, 6-17 (2020).
• 藤堂眞治, 常行真司,
  X線回折実験とシミュレーションのデータ同化による結晶構造解析,
  日本結晶学会誌 62, 51-55 (2020).
• 井戸康太, 加藤岳生, 三澤貴宏, 藤堂眞治,
  ソフトウェア紹介「物質科学シミュレーションのポータルサイトMateriApps ― 分子動力学シミュレーションのはじめの一歩,
  分子シミュレーション学会誌 “アンサンブル” 22, 74-80 (2020).
• 藤堂眞治,
  「1968年のモンテカルロシミュレーション」50周年に寄せて,
  日本物理学会誌 74, 787-789 (2019).
• Synge Todo,
  Monte Carlo study of Ising model with non-integer effective dimensions,
  Invited review article in Annual Report 2017 of Supercomputer Center, Institute for Solid State Physics, University of Tokyo (2018).
• 本山裕一, 三澤貴宏, 加藤岳生, 藤堂眞治,
  物質科学シミュレーションのポータルサイト MateriApps,
  固体物理 52, 743-755 (2017).
• 山地洋平, 三澤貴宏, 吉見一慶, 河村光晶, 藤堂眞治, 川島直輝,
  量子格子模型の汎用数値対角化パッケージHΦ -スピン液体近傍の熱・スピン励起への適用-,
  固体物理 52, 539-550 (2017).
• 西野友年, 大久保 毅,
  テンソルネットワーク形式の進展と応用,
  日本物理学会誌 72, 702 (2017).
• Tsuyoshi Okubo,
  Massively parallel Monte Carlo simulation of a possible topological phase transition in two-dimensional frustrated spin systems,
  Invited review article in Annual Report 2016 of Supercomputer Center, Institute for Solid State Physics, University of Tokyo (2017).
• 藤堂眞治(編),
  ケイサンブッシツカガク,
  計算物質科学イニシアティブ (学研プラス, 2016).
• 渡辺宙志, 藤堂眞治,
  特集「『京』が拓いた物性物理」について,
  分子シミュレーション研究会会誌 アンサンブル 18, 5-6 (2016).
• 藤堂眞治,
  "実験技術"としての量子多体系シミュレーションソフトウェア ALPS,
  日本物理学会誌 70, 275-282 (2015).
• 藤堂眞治,
  新著紹介「岩波講座 計算科学 別巻 スーパーコンピュータ」,
  日本物理学会誌 68, 758-759 (2013).
• Synge Todo,
  Loop Algorithm,
  in Strongly Correlated Systems: Numerical Methods (Springer Series in Solid-State Sciences), ed. A. Avella, F. Mancini, pp. 153-184 (Springer-Verlag, Berlin, 2013).
• 藤堂眞治,
  量子モンテカルロ法による新しい量子相・量子臨界現象の探求,
  計算工学 17, 2841-2844 (2012).
• 藤堂眞治,
  計算物質科学イニシアティブ(CMSI)研究会報告,
  計算工学 17, 2765-2766 (2012).
• 諏訪秀麿, 藤堂眞治,
  詳細つりあいを満たさないモンテカルロ法,
  日本物理学会誌 66, 370-374 (2011).
• Statistical Physics of Quantum Systems --novel orders and dynamics--,
  ed. Naomichi Hatano, Naoki Kawashima, Seiji Miyashita, Masaki Oshikawa, Toru Sakai, Masahiro Shiroishi, Synge Todo, J. Phys. Soc. Jpn. Suppl. 74, (2005).
• C. Yasuda, S. Todo, K. Hukushima, F. Alet, M. Keller, M. Troyer, H. Takayama,
  New Type of Universality on Neel Temperatures of Quasi-Low-Dimensional Antiferromagnets,
  Invited review article in Annual Report 2004 of Supercomputer Center, Institute for Solid State Physics, University of Tokyo (2005).
• Synge Todo, Takayuki Arakawa, Hajime Takayama,
  Randomness Effects on Quantum Phase Transitions of Bond-Alternating Haldane Chain,
  Invited review article in Annual Report 2003 of Supercomputer Center, Institute for Solid State Physics, University of Tokyo (2004).

Doctoral Dissertations

• Ruqing Xu,
  Antisymmetric Matrix Operations for Fermi Statistics: Algorithm Formulation and Implementations (University of Tokyo, 2024).
• Ruixiao Cao,
  Improvement of numerical algorithm for quantum dimer models (University of Tokyo, 2023).
• Hayate Nakano,
  Study of Semiclassical Periodic Orbits in Kinetically Constrained Quantum Many-Body Systems (University of Tokyo, 2022).
• Fumihiro Ishikawa,
  Exploration of Classical Integrable Systems Assisted by Neural Networks (University of Tokyo, 2021).
• Daiki Adachi,
  High-accuracy tensor renormalization group algorithms and their applications (University of Tokyo, 2020).
• Toshiki Horita,
  Critical Phenomena of the Ising Model with Non-Integer Effective Dimensions - a Monte Carlo Study (University of Tokyo, 2018).
• Shinya Yasuda,
  Study of quantum criticality with strong space-time anisotropy by quantum Monte Carlo with stochastic optimization (University of Tokyo, 2016).
• Yuichi Motoyama,
  Quantum Monte Carlo approach to the quantum phase transition in terms of the Berry phase in low-dimensional anitiferromagnets (University of Tokyo, 2014).
• H. Suwa,
  Geometrically Constructed Markov Chain Monte Carlo Study of Quantum Spin-phonon Complex Systems (University of Tokyo, 2012).

Master Theses

• Sora Shiratani,
  Stochastic approximation analysis of dynamical quantum critical phenomena in long-range transverse field Ising chain (University of Tokyo, 2024).
• Takumi Kobori,
  Application of tensor network simulation for Bayesian inference of noise model from surface code's syndrome statistics (University of Tokyo, 2024).
• Keisuke Murota,
  Strategies for mitigating the negative-sign problem in quantum spin systems: basis rotation and reweighting method (University of Tokyo, 2024).
• Xun Zhao,
  Improved path-integral worm Monte Carlo method and its application to interacting bosons (University of Tokyo, 2022).
• Taito Kutsuzawa,
  Large-scale sparse-matrix diagonalization study of many-body localization in disordered systems (University of Tokyo, 2022).
• RuQing G. Xu,
  Differentiating Tensor Renormalization Group for Physical Quantities and Scaling Analysis (University of Tokyo, 2021).
• Tomoyuki Morishita,
  Machine learning critical temperature of Ising model (University of Tokyo, 2021).
• Cao Ruixiao,
  Numerical study of two-dimensional quantum dimer model (University of Tokyo, 2020).
• Chihiro Kondo,
  Measurement of entanglement entropy by ground-state quantum Monte Carlo method (University of Tokyo, 2020).
• Ken M. Nakanishi,
  Quantum-classical hybrid algorithm for estimating excited energies of quantum many-body systems (University of Tokyo, 2019).
• Motoi Suzuki,
  Event-chain path-integral Monte Carlo and its application to novel quantum phase of Bosons (University of Tokyo, 2019).
• Takuya Yamamoto,
  Tensor Network Renormalization for Non-uniform Classical Spin Systems (University of Tokyo, 2018).
• Fumihiro Ishikawa,
  Nonergodicity and localized mode in a classical harmonic chain bath model (University of Tokyo, 2018).
• Kai Shimagaki,
  Performance analysis of parameter inference using unsteady relaxation and application to inverse Ising problem (University of Tokyo, 2017).
• Daiki Adachi,
  Combined optimization method using X-ray diffraction data and ab initio calculation (University of Tokyo, 2017).
• Yasuaki Sakagawa,
  Search for novel quantum phase of He4 with continuous-space path-integral Monte Carlo (University of Tokyo, 2016).
• Koichi Yanagisawa,
  Tensor network study of two-dimensional frustrated quantum spin model (University of Tokyo, 2015).
• Toshiki Horita,
  Critical exponents and universality class of Ising model with long range interactions (University of Tokyo, 2014).
• S. Yasuda,
  Numerical Analysis of Quantum Phase Transitions with Dynamic Control of Anisotropy (University of Tokyo, 2013).
• Y. Motoyama,
  Quantum cluster Monte Carlo method for the ground state of frustrated spin systems (University of Tokyo, 2011).
• R. Kanai,
  Quantum Monte Carlo Study of Entanglement Entropy (University of Tokyo, 2011).
• H. Suwa,
  Quantum Monte Carlo Method for Particle Number Non-Conserved Systems and Application to Spin-Peierls Systems (University of Tokyo, 2009).
• K. Fukui,
  O(N) Monte Carlo Method for Spin Systems with Long-range Interaction (University of Tokyo, 2008).
• A. Shibasaki,
  擬一次元量子反強磁性体における鎖間相互作用の効果の数値的研究 (東京大学, 2007).